CDS

Accession Number TCMCG016C05320
gbkey CDS
Protein Id OMO94842.1
Location complement(join(60986..61222,61529..61699,63058..63441,63570..64226,64967..65182,65929..66277,66357..66424,66510..66605,66878..67060,67172..67382,67538..67746,68252..68341,68991..69095,69183..69251,69390..69533,69686..69761,70084..70246,70330..70411,70542..70675,70874..71054,71144..71296,71393..71487,71803..72031,72612..72665))
Organism Corchorus capsularis
locus_tag CCACVL1_05773

Protein

Length 1451aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007774.1
Definition hypothetical protein CCACVL1_05773 [Corchorus capsularis]
Locus_tag CCACVL1_05773

EGGNOG-MAPPER Annotation

COG_category J
Description rRNA processing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14550        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006356        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034455        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045943        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTGAGCTTCGTTTATTGGTTTATGATTATGTTGCTGGTTACATTGAAGGAACTGGATCTTCAGATGATCTGGAGGCTGTTAGCAGATACGAAAAGAAAAAGCATAAGCGTGGAAACATATCTACAGTCAATATGGAAATTGTTAAAAGTTTGTCGGAAGCATTCTTGATGCAGCCTCATGACTACATGCCCTGGCTTACCAGAAGTTGCAGTGATTTTAAGTCATCAAAGACTCTTTTCTTTTTGGTTTTGCTGCAGTCATTTTCAATGCTGGAAAACAATGGGAAAGTTTTGGTGCTTTTTGAAGCTTGCTTTCCAGTCCTGAAGTCTGAGTGGGAAGCTTTTGGGTCTGTAGCTGACGATTCTCTGCAACAGTTCAATGAAGAGATGCTTGGCTGGGATTCCAGAAAATTTCTAGATCAGCTGTTTGTTGCTGATATTGATTTACTAAACAAGGATATTCTTATTTGCATATTTTGGAGGTTACTCGAGGCATTTGTTTCAGCAGTGTCATCGGAAGTCTTTTTGGATGATATTCAGAAGGCTGTTGACCAAGGGCAGGATTTCTTCATCTTTGTTGCGATCTCTAATTTGAAATATGCATTCAAGAAACACCTTCCAGAACTTGTTAAGAAATATCTTCCTGGCTTTCTTGGAAAGTGCAAGGATTCACCAGTTTCATTTTTGTCTAGCTTTTATACAGTAGAAGATGTTCCTGTTGCAGTGCAAGTAGAAAGTCTTCACTGCTTTGCATACCTTTGTTCTCAGCTAGATGAAAGGCTACCAGTTGAACTTCTTGATCAGTTTCCCTCACTTCTTGTTCCACTAGCTAGTGACAATCAGGCAACTAGGATTGCTGCTATGGACTGTATTGAAAAGCTATATAAATTGTGGTGTCAAGTTGACTTTTCTAGCAAGAAAAATGGAAACAGTGCAATTTGGAGCCATTTTCTTGATGAAGTTTTGGGGTTGTTGGTTCAACAAAGGAGGCTTTTATTGTCAGACAAAAATTTCCTCCCTTCTCTTTTGACATGTTTGCTTAGCTCATCCTGTGATAGCATCATGGTGTCTCAAGACATTGAGCAGAGATTTAATCAATCTACAAAGGAGAAGATTCTTTCTTTCATATTGAATTCTGCTCTAAAGCTTTCTGAATCTGGCAAGCTAAAGGTTCTATCTTTGTTGAAAGGATTAGGCAATGCAATTTTGCATGTTAAAGAGGTTGATTCATTGTTATCTCTGCTACTGAAAAAGTCATCCCAGGAACTGTCAGAAATTGAAGTCAGGATTCTGTGCTTGCTTTTGGAGATTTGTGTTGTGCCCTCATCGTCTCTCGGTGGACAAATTTCTGAAGGTCATGTGTTCAAGGCATTGGAATTGGATTTAAAGTCTCCAGAAGACCGTGCCATTATAGAACCTTGTCTTACTGTTTTGCAAAAGCTAAGCAGTCAATTCTACAGTGGCTTGACGGCTGAGGCCCAGGGTCATCTTTTCCGACAACTAGTACTCTTGTTTCGCAATGGTAATGGTGATGTTCAGAGTGCAACCAGAGATGCTTTGCTGCGATTAAATATTGCTTCCTCTACAGTAGGTCAGATGGTTGAGCTTGTACTGAAAGAGGATCAACTCATTACTGGCTCAGGACATGGAAAGAAGAAAAAAAAATCAGCTGAGAAATCAATGCCTGGTTATTATAATGTAGTTTTTAAAGGAGAACAGGCTCTTTATTTCCTCAGCTCCCTTCTTGATGTGTTGCTATTGAAGAAAGACATGGTAGACAGGCAGTTGCTTGTGGATCCCTTATTTAAGCTTCTTGGAAAAGTTTTCTCTGACGAGTGGAGACATGGCACTCTCACTCAAGATGAAAGAGAAATACAATCTTCTAATGCGTCTCAGGCAATATCTAGTTCGATTTGTTACATTCAGCAGACGTTATTGTTAGTTCTGGAAGATATTTGTGCTTCATTGAAGAATGCAAATAGTCCCGTAAAGGATGGCATAACTAATAAAATCGATATCAAGATGCTGGTTGATTGTGCTCGTTTGACGATGGACGGAGTTACCCGCAACCATATCTTTGCACTTTTAACATCGGTGGCAAAATTAGTTCCAACTAGAATATTGGAGCACATATTGGATATACTTACTGTCATTGGAGAATCAGCAGTTTCACAGATTGACAGCCTTTCACAACATGTGTTCGAAGAACTTATATCTGCTATTGTTCCATATTGGCTGTCGAAGACCAACAATAAAGAACAATTACTTCAGATTTTTGTAAATGTACTGCCTGAAGTTGCTGAGCATAGAAGGCTTTCAATTGTTGTATTCTTATTGAGGATTTTGGGGGATACTGATAGTTTTGCTTCATTGCTTGTCCTCCTTTTCCATTCCTTAGTCTCAAGAAAAGGTCTATCTTCCCTTAATGAAATGTACACTTCAGATAGTTTTTTGGTCTCTGCACAGAGAGAGTGGGAGTATGCCTTTGCAGTGCATATATGTGGGCAATATTCGTGCCAGATATGGCTTCCATCTATTGTAACAGTGCTTCAATTGATTGGAAAGAGTGATCTTTCTCAGGAACTGGTTATGCAGTTGTTGTTTGCCATGAATTTTCTTTTGCACAAATTGCAAGACCCAGAGTTTGCATTGAAGCTTGAGTTAAAGGAGAACTTAAACGGCATCCAGAGGACTCTTGGAGAACTCATGGAGCAGTTAGTCTCTCTCTTACAAGAAGTTGATGCAAGAAGAAAGCAATTAGGCATCTCAGTTGCAATTTGGAAAGAGTTTAAGGCGTGCGTACGTGCTATCTTGAAGACTATTACAATGGCTATAACCCCTTCCACATGCTTCGAATGCATCACTAAATTACTTGGCAATTCAGATGGCACTGTGAGAAAGAAGGCTCTTGGCATATTATGTGAAACTCTTAAGGACTATGACTCAGTTAAAACAAAGCGCAAGGAGAAAAGAGAAATGGACCTGGATTCAAATAGGTATGAGGTCTATTTGGATGATGCTGCTCTGGAATCCTTTGAGAAGATGTGTGCAGAAATTGTTCAGATAGTTGATAATTCTATTGAGGAATCCAATGCTTCATTGAAACTGGCAGCAGTTTCAACACTGGAACTCCTGACACAGAGATTTTCTTCTACATATTCAGTCTTTGGCATGTGCCTTGCATCAGTTACAAAAGGCATTAACTCAGAGAACCTGGCCGTCTCTTCCAGCTGCCTTAAGACGACTGGTGCTTTGGTTAATGTGCTTGGACCAAGGGCATTGGCTGAGCTCCCTTGTGTAATGGAAAATCTTATCAAAAAGTCTCGTGAAATTTCTCTGAGCTCCAAATCAAAAAGCAAAAATGATGAAAATACTTCCATTTTTCTGTCTATTCTTGTTGCTTTGGAGGCAGTTATTGACAAACTTGGTGGCTTTTTAAACCCATATCTTGGGGATATCATAGAACTTATGGTACTTCATCCTGCATATGTGTCTGCATCAGATCTAAAGCTGAAATTAAAAGCTGATTTAGTTCGAAAGCTCCTGACCGATAAGATCCCTGTTCGACTTACTCTTCAACCTTTGTTGAAGATATATTCAGGTGCTGTTAAATCTGGAGATTCAAGCTTGGTGATTACTTTTGAAATGTTAGCAAACCTAGTTAGTAAAATGGATAGGGCATCAGTTAGTGGTCACTATGTGAAGATTTTTGACCAGTGCATGGTTGCGCTTGATCTTCGCCGGCAGCACCCTGGTTCATTTCAGAATATTGATGTTGTAGAAAAAAGTGTTATCAGTGCAATAGTTTCTCTTACAATGAAACTTACAGAGAATATGTTTAAACCTCTCTTTGCCAAGACTATTGAGTGGGCTGAGACAGAGGTTGAAGATGTTGCTGTTAGTGCAAGCACAAACATAGATAGGGCTATATCATTCTATAGTCTGGTTCTATTGAAACCCACTGTTTCGCAGCTTGTCATTGAGCCACCGACTTCAATTGAAGAATATCCTGATATACCATCAGTGAAGGAAGTAGATGATTTGTTAGTTAATTGCATTGGTCAGATGGCTGTTACTGCAGGAAATGACCTACTGTGGAAACCTCTCAACCATGAGGTGTTGATGCAAACTCGGAGTGAGAAGATTCGAGCTCGAGTTTTGGGTCTTAGGATAGTGAAACAGTTGCTTGATAATCTCAAAGAAGAATATGAGGTACTCTTTGTTGAAACCTTCCCCTTCCTGGCTGAACTGCTCGAGGATGTGGAGTTACCTGTTAAATCATTGGCGCAAGATATTCTGAAGGAGATGGAGACCTTGAGCGGCGAAAATATTCAACAATACCTAGGCAGATAA
Protein:  
MLELRLLVYDYVAGYIEGTGSSDDLEAVSRYEKKKHKRGNISTVNMEIVKSLSEAFLMQPHDYMPWLTRSCSDFKSSKTLFFLVLLQSFSMLENNGKVLVLFEACFPVLKSEWEAFGSVADDSLQQFNEEMLGWDSRKFLDQLFVADIDLLNKDILICIFWRLLEAFVSAVSSEVFLDDIQKAVDQGQDFFIFVAISNLKYAFKKHLPELVKKYLPGFLGKCKDSPVSFLSSFYTVEDVPVAVQVESLHCFAYLCSQLDERLPVELLDQFPSLLVPLASDNQATRIAAMDCIEKLYKLWCQVDFSSKKNGNSAIWSHFLDEVLGLLVQQRRLLLSDKNFLPSLLTCLLSSSCDSIMVSQDIEQRFNQSTKEKILSFILNSALKLSESGKLKVLSLLKGLGNAILHVKEVDSLLSLLLKKSSQELSEIEVRILCLLLEICVVPSSSLGGQISEGHVFKALELDLKSPEDRAIIEPCLTVLQKLSSQFYSGLTAEAQGHLFRQLVLLFRNGNGDVQSATRDALLRLNIASSTVGQMVELVLKEDQLITGSGHGKKKKKSAEKSMPGYYNVVFKGEQALYFLSSLLDVLLLKKDMVDRQLLVDPLFKLLGKVFSDEWRHGTLTQDEREIQSSNASQAISSSICYIQQTLLLVLEDICASLKNANSPVKDGITNKIDIKMLVDCARLTMDGVTRNHIFALLTSVAKLVPTRILEHILDILTVIGESAVSQIDSLSQHVFEELISAIVPYWLSKTNNKEQLLQIFVNVLPEVAEHRRLSIVVFLLRILGDTDSFASLLVLLFHSLVSRKGLSSLNEMYTSDSFLVSAQREWEYAFAVHICGQYSCQIWLPSIVTVLQLIGKSDLSQELVMQLLFAMNFLLHKLQDPEFALKLELKENLNGIQRTLGELMEQLVSLLQEVDARRKQLGISVAIWKEFKACVRAILKTITMAITPSTCFECITKLLGNSDGTVRKKALGILCETLKDYDSVKTKRKEKREMDLDSNRYEVYLDDAALESFEKMCAEIVQIVDNSIEESNASLKLAAVSTLELLTQRFSSTYSVFGMCLASVTKGINSENLAVSSSCLKTTGALVNVLGPRALAELPCVMENLIKKSREISLSSKSKSKNDENTSIFLSILVALEAVIDKLGGFLNPYLGDIIELMVLHPAYVSASDLKLKLKADLVRKLLTDKIPVRLTLQPLLKIYSGAVKSGDSSLVITFEMLANLVSKMDRASVSGHYVKIFDQCMVALDLRRQHPGSFQNIDVVEKSVISAIVSLTMKLTENMFKPLFAKTIEWAETEVEDVAVSASTNIDRAISFYSLVLLKPTVSQLVIEPPTSIEEYPDIPSVKEVDDLLVNCIGQMAVTAGNDLLWKPLNHEVLMQTRSEKIRARVLGLRIVKQLLDNLKEEYEVLFVETFPFLAELLEDVELPVKSLAQDILKEMETLSGENIQQYLGR